Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944423.1_cds_XP_016487236.1_77993
CDS Infomation

[gene=LOC107807394] [db_xref=GeneID:107807394] [protein=IAA-alanine resistance protein 1-like] [protein_id=XP_016487236.1] [location=join(4140..4776,6410..6493,6599..6648,8079..8130,12267..12383,13039..13322,14042..14188,14288..14395,14778..14879,14961..15005,15096..15251)] [gbkey=CDS]
Sequence

ATGTTATCCTTAAATTCAGTACAACCTTTCTGCAATTCTCAGAGGACCAAACTCCATTTT
TGTTACACACTTGAGGCCCAACTTTCAAAGTCAAACCCCTTGTACTATGGATGTAGTAAC
ATTCGGCATTATAATAGGCATAATAATACTCTTCTTCTGCGCTGTTTGTGTCTTCACCAT
CGAAGGCACTTGCAAAAATCGCAATTCTTGATTCCAAACGCCCTTTTCCCAAACACGCCC
TTATCACCCTCTGCCTCTATACCCTCCATAAATTTAGGGGTTTTACCTGATTTTGTTCGT
GCCCAGATTGAAAAAATGTCAAAGATTGAATCTTTACTGAAACAGATCTGCTTCTGTTTA
ATCATTTCTATTTCTTTAGGGTTAGTGATTTTTGGGTCTTCTTTATCAGCTGAAGCTCAC
CAGTGTAACCATGGTCATGGGCATGACCATGACCATGACCATCAGGGGCATCATCATCAT
CATCATCATCATGGGGTGAGTGAAGTTAAGCAGAGGAAGCTTCCAGAAGAATTAGCAGAA
GAGGAGGATCTAAAGCTGTTAGGATTTGGGTTCCATGATGACGTGGATGTGCACCATCAT
CATAATGGAGATGGAGCCAAGGATCTTACTGGTCTTGGTCTTTGGGTCAATGCAATGGGT
TGCTCACTGTTGGTGAGCTTAGCTTCTCTTATATGCCTGATTATTTTGCCTGTAATATTT
TTAAAAGGGAAGCCGTCAAAAGCTGTTGTTGATTCTTTGGCGTTATTTGGGGCAGGAGCC
ATGCTGGGGGATGCTTTCCTTCACCAATTGCCACATGCTTTTGGTGGTGGACGCTCCCAC
TCACATGATCACCATGTGGAACATGATCATCTTCATGATCACTCCGGTCATTCACATGCG
CATTCGTTGGAGGATCTTTCTGTTGGATTGTCCATTCTGGCTGGAATTGTGCTCTTTCTT
ATTGTTGAGAAGCTTGTGAGGTATGTTGAAGATTTTTCTGGAGGAGCCGATGAATGGAGT
CATGATCATCATCATCATCATCATCGTCATACTCACATCACAAAATTGAAGGATGACGAT
GATGCTAATGACAACGACCAGGAACTGTCTCTGAAGAAGAGCGGAAACCTATCAGAAAAG
ACAGCTGGAGGGAGTGACGTGGACGGTGTGTCTGCTGACTCTCCCAATGGGGAAAAGCCA
AGTGGAGGAGCTGTTCTCCGGAAGAGGAATACTGGCTCCAGTGCTGCTGACGACAATACT
GTTTTAGATGCTGCAAATTGCTCTACCAATTCTGAGTCAGTTGGAAAGGAACAAGCTAAA
TCACGGTCAAGCCTTGTCTTTGGTTATCTCAACCTCTTCTCTGATGGTGTTCACAATTTT
ACTGATGGGATGGCATTGGGAAGTGCATTCCTCCTTTATGGATCAGTTGGTGGGTGGTCA
AGAACTTTGTTTCTTCTCGCTCATGAGCTCCCTCAAGAGATAGGTGACTTTGGAATCTTG
GTAAGGTCGGGGTTCAGCGTCTCCAAAGCTCTCTTCTTTAACTTCTTATCTGCACTAGTG
GCACTAGCCGGAACTGCACTGGCATTGACGTTGGGACAAGATTCTGGTCAGTCGTCATTG
ATTGAAGGTTTTACTGCTGGCGGCTTCATCTACATTTCGGTTGCTGGGGTGTTGGCTGAA
ATGAACAGTAGTGGCAGGACTACATTGATGAATACAGTAATCCAACTTATCTCACTAATA
TCAGGGATGGCTGTTGCTCTTTGTATCTCCCTTGTTGAATGA

Peptide Sequence

PEP ID

XP_016487236.1
PEP Infomation

PREDICTED: IAA-alanine resistance protein 1-like [Nicotiana tabacum]
Sequence

MLSLNSVQPFCNSQRTKLHFCYTLEAQLSKSNPLYYGCSNIRHYNRHNNTLLLRCLCLHH
RRHLQKSQFLIPNALFPNTPLSPSASIPSINLGVLPDFVRAQIEKMSKIESLLKQICFCL
IISISLGLVIFGSSLSAEAHQCNHGHGHDHDHDHQGHHHHHHHHGVSEVKQRKLPEELAE
EEDLKLLGFGFHDDVDVHHHHNGDGAKDLTGLGLWVNAMGCSLLVSLASLICLIILPVIF
LKGKPSKAVVDSLALFGAGAMLGDAFLHQLPHAFGGGRSHSHDHHVEHDHLHDHSGHSHA
HSLEDLSVGLSILAGIVLFLIVEKLVRYVEDFSGGADEWSHDHHHHHHRHTHITKLKDDD
DANDNDQELSLKKSGNLSEKTAGGSDVDGVSADSPNGEKPSGGAVLRKRNTGSSAADDNT
VLDAANCSTNSESVGKEQAKSRSSLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWS
RTLFLLAHELPQEIGDFGILVRSGFSVSKALFFNFLSALVALAGTALALTLGQDSGQSSL
IEGFTAGGFIYISVAGVLAEMNSSGRTTLMNTVIQLISLISGMAVALCISLVE

Transcript Sequence

Gene sequence data has not been registered.